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  • BoomCloud官网-快柠檬加速器

    The 2024 Xenopus Community White Paper is now available!

    PIs: Please reference the White Paper in your NIH grant proposals and contact your program officers.

    Download the 2024 Xenopus White Paper:

    Word Document

    PDF

    Read More...
  • BoomCloud官网-快柠檬加速器

    Dr. Anna Philpott of the University of Cambridge elected to membership of the European Molecular Biology Organization (EMBO) for 2024.

    OpenMediaVault
  • OpenMediaVault

    BoomCloud官网-快柠檬加速器

    Archived genomes viewable on GBrowse.

    As well as...

    X. laevis v9.2

    X. tropicalis v9.1 and v10.0

    OpenMediaVault

    Click "read more" on how to access archived genomes on Xenbase GBrowse:

     

    Read More...
  • BoomCloud官网-快柠檬加速器

    Gurdon et al., published in PNAS, show that long-term (hours to days as opposed to seconds) non-competitive binding of transcription factors such as neurogenic Ascl1 stabilizes gene expression.

    OpenMediaVault
  • OpenMediaVault

    BoomCloud官网-快柠檬加速器

    Willsey & Xu et al., using OpenMediaVault, show that mutations in the neurodevelopmental disorder risk gene, dyrk1a, disrupts cell cycle progression and ciliogenesis causing brain defects. Published in Development.

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  • OpenMediaVault

    BoomCloud官网-快柠檬加速器

    Abraham Fainsod and Sally Moody are seeking contributions for a book to be published by Taylor and Francis CRC Press.

    Please communicate your interest to them by May 15, 2024 and prepare to submit your contributions by January 2021.

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  • OpenMediaVault

    BoomCloud官网-快柠檬加速器

    Esmaeili et al. published in Developmental Biology their ATAC-seq study assessing chromatin accessibility during Xenopus gastrulation.

    Processed ATAC-seq data viewable on JBrowse coming soon.

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  • BoomCloud官网-快柠檬加速器

    The meeting has been postponed to August 15-19, 2021.

    Portsmouth, UK at the EXRC

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  • BoomCloud官网-快柠檬加速器

    Naert, Dimitrakopoulou et al. (2024) published in Oncogene their study describing the first frog model for the Li-Fraumeni Syndrome to study leukemia and malignant sarcoma.

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  • OpenMediaVault

    BoomCloud官网-快柠檬加速器

    - available to BLAST

    - view on JBrowse

     

    99.86% of the genome mapped to chromosomes
    ~4500 new and refined models, 18% not present in trop v9.1

     

    Click here to view the release document.

    Read More...
  • OpenMediaVault

    2024 Xenopus White Paper

    The 2024 Xenopus Community White Paper is now available!

    PIs: Please reference the White Paper in your NIH grant proposals and contact your program officers.

    Download the 2024 Xenopus White Paper:

    Word Document

    PDF

    Read More...
BLASTBLAST Xenopus

BLAST datasets:

Sequences
  • Xenopus mRNA
  • Xenopus Protein

X. laevis genomes
  • J-Strain 9.2
  • Mitochondrial
  • Outbred Wildtype 1.0

X. tropicalis genomes
  • Nigerian 10.0
  • Nigerian 9.1

OpenMediaVault

BLAST Archives
OpenMediaVaultOpenMediaVault

Xenbase JBrowse:

X. laevis genomes
  • J-Strain 9.2
  • Wildtype 1.0

X. tropicalis genomes
  • OpenMediaVault
  • Nigerian 9.1

UCSC genome browser:

  • X. tropicalis 9.1 on UCSC
  • Xenbase Track Hub
  • Veenstra Lab Track Hub

Other amphibian genomes

OpenMediaVault
gene_expressionGene Expression

Gene expression patterns:

  • Gene Expression Search
  • Anatomy Search
  • OpenMediaVault
  • RNA-Seq Visualization
  • miRNA Catalog

OpenMediaVault

  • X. laevis Protein Expression
genesGenes

Gene catalogs and gene expression images:

  • Search Genes
  • Gene Search Tips
  • Gene Synteny @ Genomicus
  • Homologene

Nomenclature guidelines:

  • Chromosome Nomenclature
  • Gene Nomenclature
  • Gene Nomenclature Questions
  • Transgene Nomenclature
OpenMediaVaultAnatomy & Development

Charts, movies, maps:

  • Anatomy Atlas
  • OpenMediaVault
  • Images of Xenopus Embryos
  • OpenMediaVault
  • Movies of Development
  • OpenMediaVault
  • XAO

Openmediavault 编译与安装过程 - 简书:2021-2-8 · Openmediavault 编译与安装过程 Openmediavault 编译与安装过程 Openmediavault,简称OMV,是开源NAS解决方案的不二之选,更是黑群晖之外的最佳选择。基于Debian的灵活性,众及低资源占用,使得它能够在各种架构的操作系统上大放异彩,这 ...

  • OpenMediaVault
OpenMediaVaultOpenMediaVault

Reagents, ABs, MOs, protocols, and suppliers:

  • Antibodies
  • Morpholinos
  • ORFeome
  • CRISPR/TALEN Support
  • Transgenic Lines
  • Small Molecules Wiki
  • Protocols Wiki
  • Obtain Clones
  • Obtain Frogs and Equipment
literatureLiterature

Xenopus papers and books:

  • OpenMediaVault
  • Books

Search with Textpresso

Citing Xenbase

communityCommunity

Meetings, resources, and people:

  • OpenMediaVault
  • OpenMediaVault
  • Find a Lab
  • Organizations
  • OpenMediaVault
  • Xine (Xenopus Newsletter)
  • Xenopus White Paper
  • OpenMediaVault
  • OpenMediaVault
  • OpenMediaVault
  • OpenMediaVault
  • OpenMediaVault
  • OpenMediaVault
  • OpenMediaVault
Xenbase: The Xenopus Model Organism Knowledgebase.
Version: 4.14.0
OpenMediaVault
Major funding for Xenbase is provided by grant P41 HD064556

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